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1. Database search: Perform fast protein identification using the MASCOT search engine.
2. Peptide Quantitation: Peptide quantitation results are output by two ways, the first method is determining the precursor change states, which uses three features, including the precursor mass, m/z, and its location in the peptide; the second method is using the modified peptide, by adding an Arg or Lys residue at the N-terminus, and then determining its mass.
3. Data extraction: You can get real results from PICS results with the help of EmLin and jMorpheus. EmLin is a very efficient tool for spectra export and cross match.
4. Bias correction: The tool can process biased data to get ideal peptide identification results.
5. Supervised Peptide Quantitation: Bias correction is used, but results are not ideal.
6. Protein quantitation: You can determine the precursor change states for each peptide and get results.
7. Protein Quantitation: It is more efficient than determining the precursor change states, but it still does not work well.
8. Unsupervised Protein Quantitation: It is just for bias correction.
9. Matching: You can add more precursors to search in future and the result will be very helpful.
10. Feedback: The user can directly get feedback about the result.
11. Supplementary feedback: If the search hits more than one or more missed peptides.
12. Support: The user can directly contact us on Facebook.
13. User Manual: you can download the user manual.
14. License: Licensed under GNU GPLv3.
15. Contact: You can contact us on Facebook.

Unoqual is a free software written in Python which can compare mass spectrometry peak files and produce a new file that only contain the peaks that are different.
Unoqual was designed for protein and peptide identification, but it can also work for other applications.
Unoqual works on a simple way: by comparing every two files you choose, it will generate a new file containing the different peaks.
This file can be used for further analysis.

A simple utility for analysing peak lists in Spectral Data (PIC and TIC) files. It can also compare peak lists of two files at once. It outputs peak lists to a CSV file with a few additional lines to support a peak-search 70238732e0

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How to trim a character from an XML document in C#?

I have an XML document like the following:

LE0
light

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I want to trim the ‘LE’ character from the start and ‘0’ from the end in the whole document.
I am using the following code to access the nodes, but I am not sure how to trim the node values:
// XML node
XmlNodeList itemList = xmlDoc.SelectNodes(«WORDLIST/

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